I realized that I have been using a newer version of Metaxa than most of you for the last couple of months. This bug fix was written sometime in February or March, and we have kept it internal to make sure it works as it should. Then other things came across and we never got around to actually release it. But with testing passed and upcoming versions of Metaxa in the pipeline, I think it is about time that everyone gets their hands on the latest Metaxa version.
It’s only two small things this time:
Slight tweaks to the new HMM scoring system, making Metaxa just a little bit faster
Fixed a rarely occurring bug causing the –heuristics options to be ignored in certain circumstances